|
CALL
FOR POSTERS!
AOAC PNW Section invites you to submit
a Poster Presentation at the 2008 Pacific Northwest
Meeting.
[Click here to view Abstracts
for submitted posters.]
The poster topic areas are:
-
Botanicals and Dietary Supplements
-
Detection and Measurement of Natural Toxins
-
Emerging Issues in Food Safety and Security
- Feeds,
Fertilizers and Related Agricultural Topics
- Food
Nutrition and Food Allergens
- Microbiological
Reference Methods
- Pharmaceutical
Analysis, Authenticity and Safety
- General
Analytical Methods, Quality Assurance and
Accreditation
- Seafood
Toxins
- Environmental
Microbiology/Chemistry
- Clinical
Microbiology/Chemistry
- Molecular
Biology
- Physical
Sciences
Poster Presentations will be held on June 18,
Wednesday 11:30 am to 2:00pm.
To submit a Poster Presentation, at least one
of the poster authors must register for AOAC
PNW Section. To register for the Annual Meeting
please visit our website. All poster submitters
MUST pre-register by May 31, 2008. If you do
not pre-register by May 31, your name will not
be printed in the Final Program.
If you are planning to present a poster please
let the Poster Committee Carlos Abeyta, Jr.
(carlos.abeyta@fda.hhs.gov or 425.483.4890),
Mike Grant (mike.grant@fda.hhs.gov or 425.402.3179),
Fred Krick (pestchem@msn.com or 206.522.8013)
or Don Bark (don.bark@fda.hhs.gov or 425.402.3165)
know by May 1, 2008.
Submission of Abstracts: Abstracts will be published
at our website. Submit abstracts to Carlos Abeyta,
Jr. (see email above). Please include the following:
1. Your name and title.
2. Affiliation and address
3. Title of your paper
4. Abstract body.
For example:
“A Rapid Method for Determining E. coli
0157:H7”
John Smith, Microbiologist, U.S. Food and Drug
Administration, 22201 23 rd. Dr. S.E. Bothell
Washington 98021-4421
Abstract Body
GUIDELINES
FOR Preparation of Posters:
1. Dimension of poster should not exceed 1 meter
X 1 meter.
2. Freestanding boards will be provided for
presenting posters and pins will be provided.
3. All posters must be written in English. If
the author is non-English speaking, consider
having the poster reviewed by an English-speaking
person before submitting.
4. All posters should include the title and
author information, abstract, methods, results
and discussion.
POSTERS:
Quality
Assurance - Why & How Should Laboratories
Seek Accreditation?
Jerry Hirsch, JH Techright Consulting Services,
#1 – 2842 Whatcom Road, Abbotsford, BC
Canada V3G 3B8, hirschj@shaw.ca
Laboratory accreditation has become
an important issue in Canada, the USA and internationally
for both commercial and government analytical
laboratories. Accreditation, while not guaranteeing
that a given analytical result is correct, provides
some assurance of the technical and professional
competence of a laboratory. Laboratories need
to address issues such as Quality Management,
Quality Assurance and Quality Control as part
of the process in developing an effective Quality
Management System that generates analytical
results meeting client requirements. This paper
describes the steps and basic procedures that
need to be followed for an analytical laboratory
to become accredited ISO 17025.
Disparities
between antibiotic resistance genotypes and
phenotypes from calf-origin, commensal Escherichia
coli
Margaret A. Davis, Thomas E. Besser, Amelia
Lanie, Shira Broschat, Lisa Orfe, Daniel New,
Douglas R. Call. (Dept. of Veterinary Microbiology
& Pathology, Washington State University,
Pullman, WA; WSU-Zoonosis Unit, Washington State
University, Pullman, WA; School of Electrical
Engineering and Computer Science, Washington
State University, Pullman, WA)
Bacterial genomes undergo a low rate of genetic
mutation whereby deleterious mutations are purged
from populations and advantageous mutations
increase in frequency. Many enteric bacteria
harbor antibiotic resistance genes that are
irrelevant to conventional antibiotic use. For
example, in the United States, streptomycin
and chloramphenicol have very limited uses in
agricultural animal husbandry. Consequently,
we expect these rarely selected genes will undergo
mutations that are selectively neutral even
if these mutations eliminate the ability of
the gene to produce a functional protein. In
an equilibrium state, dysfunctional genes will
be purged from the population, but before equilibrium
we should observe cases where antibiotic resistance
genes are present in strains of enteric bacteria,
but no corresponding phenotypes. To test this
hypothesis we compared the resistance genotypes
and phenotypes of 52 commensal E. coli isolates
from calves. Enteric E. coli populations in
young animals are dynamic, and likely do not
reach equilibrium before adulthood of the host.
Thirty isolates were from a dairy calf-raising
operation and 22 were from a beef cow-calf operation;
the former represents an environment with intense
antimicrobial selection pressure while the latter
is more representative of an environment with
little to no antibiotic selection pressure.
We determined resistance phenotypes using a
standard disk-diffusion assay with a panel of
12 antibiotics. To assay resistance genotypes,
we hybridized bacterial genomic DNA with an
oligonucleotide microarray developed for the
project and containing 203 resistance and virulence
gene probes. Microarray hybridizations identified
13/52 isolates (26%) with genotypes that did
not exhibit resistance phenotypes. There was
no significant difference between the two types
of cattle operations (6/30 compared to 7/22,
Chi sq P=0.33). Although our hypothesis that
resistance genes would be more likely to degrade
in the absence of antimicrobial selection pressure
was not supported by these data, the overall
high proportion of isolates with non-functioning
resistance genes was unexpected. To characterize
the genetic events underlying this resistance
gene degradation, we examined the DNA sequences
for unexpressed resistance genes and found evidence
for nonsynonymous point mutations and potential
inversions that may explain the failure of these
genes to express correctly. We also observed
eight cases whereby resistance phenotypes were
present in the absence of corresponding genotypes.
These cases probably represent instances where
our microarray probes do not correspond to a
known gene, or cases of novel genes that warrant
further investigation.
A
Multiplex Assay for Rapid Detection and Differentiation
of Campylobacter jejuni and Campylobacter
coli Using Real-Time PCR
Don H. Bark, Carlos Abeyta Jr., Heidi Marks
(US FDA - Bothell, WA), Jinxin Hu (Washington
State Health Laboratory - Shoreline, WA)
The thermophilic Campylobacter species, particularly
C. jejuni and C. coli are among the most frequently
isolated cause of bacterial. Reports have shown
that Campylobacter jejuni causes more disease
than Shigella spp. and Salmonella spp. combined.
The rapid detection of bacterial pathogens from
food has become increasingly important, both
for consumer protection, and for trace back
investigations of outbreaks. This work describes
a rapid identification method for C. jejuni
and C. coli. The technique is a real-time multiplex
PCR method that provides genus and species identification
of these two bacteria in 2 hours from isolated
colonies. The method is also amenable to identification
directly from enrichment. The target for the
primers and probe are sections of the ceuE that
codes for a membrane protein responsible for
transfer of enterochelin-iron complexes across
the cell wall. Polymorphic sections of this
gene (C. jejuni accession X82427, C. coli accession
X88849) were selected to design specific primers/probe
sets to differentiae C. jejuni and C. coli.
The amplicons generated by this RT-PCR method
are 61 and 81 BP, respectively. Routine PCR
analysis was conducted on the SMART Cycler.
Results have shown that this method is sensitive
(~1 target detected in monoplex mode) and specific.
The method did not recognize any of the non-Campylobacter
bacteria from a challenge panel that included
Salmonella gaminara, Listeria monocytogenes,
E. coli, Klebsiella pneumonia, Morganella morganii,
Hafnia alvei, Vibrio cholerae, and Shigella
youngae, Staphylococcus aureus, Proteus mirabilis,
Enterococcus faecalis. and Pseudomonas aeruginosa.
Genetic
Control of Flowering Time in the Allopolyploid
Arabidopsis suecica
Natalie Henkhaus, University of Puget Sound,
Department of Biology, Tacoma, WA 98416
The species Arabidopsis suecica was derived
from allopolyploidization (hybridization concomitant
with genome doubling) of the two species A.
thaliana and A. arenosa, some 20,000 years ago
in a single hybridization event. Allopolyploidization
has been implicated in widespread genomic instability
(genomic shock), epigenetic changes, gene activation
and gene silencing, genomic rearrangements and
transposon activation. We hypothesized that
the molecular consequences of genomic shock
in allopolyploids may lead to greater phenotypic
variability in the allopolyploid offspring than
in siblings of the original diploid parents.
Using thirteen different geographic accessions
of the natural allopolyploid A. suecica, we
observed phenotypic variation in germination
rate, flowering time, flower morphology, seed
yield, and pollen viability. Many genes are
known to influence flowering in Arabidopsis
through genetic and epigenetic mechanisms. These
genes are regulated internal (i.e. increase
in sugar production) and external (i.e. changes
in temperature) factors. Here, we analyze the
activity of thirteen genes in pre-bolting leaf
tissue to determine if differential expression
of genes relating to flowering-time is contributing
to the observed difference in phenotype.
Determination
of Fluoroquinolone Residues in Food Products
Using LC/MS/MS
Cathy S. Hetrick, Restek Corporation, Bellefonte,
PA 16823
Fluoroquinolones are a family of broad-spectrum
antibiotics that show great efficacy toward
both gram-positive and gram-negative bacteria.
In the United States, they are not approved
for use in farm-raised aquatic animals. Environmental
exposure from these food contaminants is suspected
to increase antibiotic resistance to this important
class of antibiotics. Studies from the Center
for Disease Control (CDC) have shown that there
may be a linkage between the use of fluoroquinolones
in food animals and the spread of drug-resistant
strains of Campylobacter in humans.1, 2 The
Food and Drug Administration (FDA) recently
announced import controls on seafood from China,
where the use of fluoroquinolones in food animals
is permitted. All incoming shipments will be
detained at the border until proven to be free
of drug residues. These current events have
created an urgent need for the fast and accurate
analysis of fluoroquinolones in food stuffs.
Enhancing Retention and
Selectivity of Unsaturated Compounds Using a
Unique Biphenyl Stationary Phase
Cathy S. Hetrick, Restek Corporation, Bellefonte,
PA 16823
Phenyl stationary phases are commonly used for
analyses of neutral or aromatic compounds in
reversed phase applications, in which they exhibit
distinct selectivity differences, relative to
butyl (C4) through octadecyl (C18 / ODS) alkyl
chain stationary phases. However, a downside
to phenyl phases is that they typically show
only moderate retention when compared to ODS
phases. As a result, advancements have been
made in phenyl bonding chemistries to increase
their overall retention capacity. One such advancement
is the development of a Biphenyl stationary
phase. A Biphenyl phase offers a more concentrated
phenyl arrangement, and a sterically favorable
positioning of the phenyl groups, by presenting
a surface chemistry that consists of two phenyl
groups bonded end-to-end.
Shopping
Smart: Eating Sustainably by Planning Ahead
Sara Montone, University of Puget Sound, Environmental
Studies Department, Tacoma, WA 98416
The average American household discards
10 to 15% of the food they purchase. This makes
up the largest component of our residential
waste. Shop Smart, a resource-efficient meal-planning
system, was the brainchild of a marketing class
in fall of 2006. In spring of 2007 their program
was tested by the Environment and Society class,
taught by Dan Sherman. The class tested three
families and several student groups to determine
if weekly meal planning with nested ingredients
reduced food and packaging waste. As a continuation
of that pilot test the aim of this summer 2007
research is to gather a background foundation
of supporting research. This includes a Literature
Review, surveys conducted at local Proctor and
Tacoma Farmer's Markets, and a testing of a
variety of methods for pre-planning meals to
determine waste/cost per portion to see it the
initial claim made by the marketing class was
best. The aim of this research is to better
prepare the next class of Environment and Society
students to conduct a possible second pilot
test by providing them with a background of
the information already in existence and recommendations
for focus.
Total
Synthesis and Evaluation of Two N-Acetylmuramic
Acid Derivatives
Kelsey Pobanz, University of Puget Sound, Department
of Chemistry, Tacoma, WA 98416
T4 lysozyme, an enzyme produced by T4 bacteriophage,
hydrolyzes the _(1-4) glycosidic bond between
N-acetylmuramic acid (NAM) and N-acetylglucosamine
(NAG) in polysaccharides chains of the bacterial
cell wall. The T4 lysozyme also requires that
NAM be substituted with a peptide side chain
in order for hydrolysis to occur. The only available
substrate is actual cell wall, which is heterogeneous,
preventing detailed, accurate kinetic analysis.
Synthesis of a smaller, well-defined and convenient
substrate, and the ability to modify the peptide
side chain in that substrate, would allow us
to study the kinetics and mechanism of T4 lysozyme.
O-nitrophenyl and p-nitrophenyl-b-glycosides
of N-acetylmuramic acid linked to Ala-D-Glu(Lys)
peptides were synthesized and purified by HPLC
and characterized by NMR. Synthesis of the substrates
of the T4 lysozyme will be discussed.
A paleomagnetic study
of the Early Jurassic Talkeetna Formation, Peninsular
Terrane, Alaska.
Erika E. Kercher and Mike Valentine, Geology
Department, University of Puget Sound, Tacoma,
WA
Southern Alaska consists of an accretionary
complex with over 50 terranes accreted over
the past 200 million years. A paleomagnetic
study was conducted in the Talkeetna Mountains
to better define the poorly understood past
movements of the Peninsular terrane and the
sequence of accretion between the Peninsular
and Wrangellia terranes. Early Jurassic basalts
from the Talkeetna Formation were sampled from
ten different sites. 8-14 cores were drilled
from each site. Thermal and alternating field
demagnetization studies were preformed to try
to determine primary thermal remanent paleomagnetic
directions from each site. Units sampled did
not yield consistent inclinations and therefore
did not indicate a consistent early Jurassic
paleolatitude for the Peninsular terrane. Within-site
scatter of paleomagnetic directions and inconsistent
demagnetization behavior suggest hydrothermal
alteration of magnetic minerals in the samples.
A study of the magnetic mineralogy through reflected
light microscopy will determine the extent of
alteration and help constrain the alteration
history of the early Jurassic Talkeetna Formation
in the Talkeetna Mountains.
Optimizing Dispersive Solid Phase
Extraction and Splitless Injection-Gas Chromatography
for QuEChERS Fruit and Vegetable Extracts
Cathy Hetrick, Restek Corporation, 110 Benner
Circle, Bellefonte, PA
QuEChERS (Quick, Easy, Cheap, Effective, Rugged,
and Safe) is a widely-adopted batch sample preparation
method for analysis of pesticides in fruits,
vegetables, and other food. Dispersive solid
phase extraction (dSPE), adding sorbent, e.g.
primary secondary amine, directly to the QuEChERS
extract, is used to provide a quick cleanup
for samples prior to their analysis with gas
and/or liquid chromatography. The effects on
recoveries from using different dSPE sorbents
on strawberry extracts containing pesticides
with a variety of chemical functionalities are
shown. Preliminary results are illustrated from
splitless injection optimization for a liner
containing a CarboFritTM.
Molecular Dynamics Simulations
of Cirrus-Like ice Crystal Growth and Sublimation
Erin K. Nugent, University of Puget
Sound, Tacoma, WA
We present classical dynamics simulations of
cirrus-like ice crystals on a time scale of
tens of nanoseconds and a spatial scale of 20
x20 angstroms. The crystal is represented as
a slab, 4-5 molecules thick, with cubic periodic
boundary conditions. We report residence times
of water molecules striking the slab, as a function
of temperature and surface structure. We assess
the robustness of these results with respect
to simulation time and modeled slab thickness.
Synthesis of a Phosphonate
Nucleotide Analog with a 3’-Carbon-Phosphorous
Bond
Steven Melhorn, University of Puget Sound, Dept.
of Chemistry, Tacoma, WA
The enzyme BamH1 cleaves the backbone of DNA
at a specific sequence between two guanine bases.
In order to study the mechanism by which BamH1
cleaves DNA, a DNA analog is being synthesized.
This analog is identical to an actual segment
of DNA except the 3'-oxygen-phosphorus bond
in the backbone will be replaced by a 3'-carbon-phosphorus
bond, allowing the enzyme to be able to bind
with, but not cleave, the DNA. The 3'-oxygen
in a DNA segment cannot simply be exchanged
for a 3'-carbon, therefore, it is necessary
to first prepare a phosphonate nucleotide analog
and then incorporate it into the desired DNA
sequence. The first seven reactions in this
multi-step synthesis have been established,
and the last steps are being developed. This
research found that the deoxygenation of the
2'-hydroxy group were particularly problematic
steps. The hydroxy group was most successfully
removed by thionization with phenyl chlorothionoformate
in a 1:1 solution of pyridine:chloroform, and
subsequently deacylated with N-tetrabutylammonium
peroxydisulfate. The final steps involve the
attachment of the dimethoxytrityl group and
the hydrolysis of the phosphonate diester.
Low-level Mercury Determination in Wastewater
Effluent Using CVAFS
Maggie Day, Mercury Product Specialist, CETAC
Technologies, 14306 Industrial Rd. Omaha Nebraska
68144.
Both local and regional regulations may require
lower mercury detection limits for wastewater
effluent, prompting more sensitive analytical
techniques. Current regulatory standards do
not require detection at the low-level; therefore,
low-level reporting data is labeled ‘non-detect’.
This reporting could potentially result in biased
data and does not give a true representation
of the total mercury in the effluent. The current
determinative technique, cold vapor atomic absorption
spectrometry (CVAAS), does not allow for sub-ppt
mercury quantitation. This paper will present
low-level mercury determination of wastewater
effluent using cold vapor atomic fluorescence
spectrometry (CVAFS). This technique allows
for analysis over a large dynamic range to obtain
accurate, quantitative data, with minimal analysis
time and detection limits ranging from 0.05ppt
to 100 ppb. Calibration, quality controls and
digested wastewater effluent samples will be
analyzed to compare and contrast single amalgamation
and non-amalgamation with CVAFS using both EPA
Method 245.7 and EPA Method 1631, Revision E.
The NIH/ODS Analytical Methods and Reference
Materials Program for Dietary Supplements: Five-Year
Accomplishments and Future Directions.
Joseph M. Betz, Leila G. Saldanha, Kenneth D.
Fisher, Paul M. Coates (Office of Dietary Supplements,
National Institutes of Health, Bethesda, MD,
20892 USA), Agnes Nguyen Pho (U.S. Food and
Drug Administration, Silver Spring, MD 20993
USA)
Quality of botanical products is one of the
greatest uncertainties that consumers, clinicians,
regulators, and researchers face. Definitions
of quality abound, and include specifications
for sanitation, adventitious agents (pesticides,
metals, weeds), and content of natural chemicals.
Validated analytical methods and reference materials
to ensure the identity, purity, quality, and
strength of constituents in natural health products
and dietary supplements are essential. Researchers
need these materials and methods to characterize
test articles used in research and ensure that
the materials are of sufficient quality that
studies can be reproduced. Regulators and industry
need them in dealing with regulatory, safety,
labeling, quality control, and manufacturing
issues. Because these products and their ingredients
are often complex mixtures, they pose analytical
challenges and methods validation may be difficult.
In response to widespread concerns about product
quality and the need for validated and publicly
available methods for DS analysis, in 2002 the
U.S. Congress directed the Office of Dietary
Supplements (ODS) at the National Institutes
of Health (NIH) to accelerate an ongoing methods
validation process, and the Dietary Supplements
Methods and Reference Materials Program was
created. The program was constructed from stakeholder
input and incorporates several U.S. federal
procurement and granting mechanisms in a coordinated
and interlocking framework. The framework facilitates
validation of analytical methods, analytical
standards, and reference materials. The major
accomplishments of the first five years of the
Dietary Supplements Methods and Reference Materials
program are collaborative efforts with FDA,
AOAC, and NIST. The ODS/FDA/AOAC project has
resulted in 18 collaborative studies of methods
for dietary supplement constituents. Seven of
the studied methods have been approved as First
Action Official Methods of Analysis (OMA) and
3 additional methods have been approved as Final
Action OMA. An additional 6 collaborative study
reports were being reviewed by the AOAC Official
Methods Board as of 3/31/08. The ODS/FDA/NIST
project has resulted in the production of 5
suites of dietary supplement Standard Reference
Materials, with an additional 12 suites in various
stages of completion. NIST has also created
a pilot Dietary Supplement Laboratory Quality
Assurance Program that will assist participating
laboratories to become proficient at dietary
supplement analysis. A more detailed account
of these accomplishments and an outline of the
future scope and direction of the program will
be presented.
Analysis
of Aflatoxins in a Dietary Ingredient
Michael R. Zahn, Research Associate, Unigen
Inc., Lacey, WA 98516
A method for the analysis of aflatoxins
B1, B2, G1, and G2 in a dietary ingredient (Product
A) consisting of Scutellaria baicalensis and
Acacia catechu extracts has been developed at
Unigen. Sample cleanup was challenging due to
the product’s unique and complex matrix.
Current official and industrial methods, such
as HPTLC, ELISA test strips, and immuno-affinity
columns were tested but found to be unsuccessful
due to the presence of interferences. The method
developed, modified from AOAC 990.33, utilizes
partition in conjunction with a silica gel column
clean up and then pre-column derivatization
before RP-HPLC analysis at 365nm and 440nm as
the excitation and emission wavelengths, respectively.
Results showed that the average recovery for
total aflatoxins was approximately 70% and none
of the samples tested contained detectable aflatoxins.
Brinkmann
Titrator Delivery Analysis
Teresa Wenda, Dairy Scientist and Cole Monnahan,
Agricultural Statistician, USDA Federal Milk
Market Administrator, Bothell, WA
The Brinkmann Titrator was suspected of causing
a pattern of errors in analysis through inaccurate
delivery volumes. Delivery accuracy was tested
by “titrating” a particular volume
of HCl into a narrow mouthed Erlenmeyer flask
on an analytical balance (0.0001g precision).
The mass, delivered volume, and temperature
of certified 0.1000N HCl were recorded. A calculated
volume was obtained using the mass and density
of HCl and compared to the delivered volume.
Differences in density due to HCl temperature
variations were observed, and data was “corrected”
for these variations. Multiple operators with
unique techniques, all performed analyses on
different dates throughout a range of volumes
and pump speeds. Our particular analysis involves
raw milk protein content as determined by the
Kjeldahl method. The theory was that at higher
delivery volumes the error in delivery was greater,
causing larger protein differences. In testing
the Brinkmann, it was discovered that the HCl
temperature has a noticeable effect on the final
results; however upon further analysis, this
effect was found to be small in comparison to
the inherent variation of the Kjeldahl method.
Nevertheless, the most significant outcome of
this study was that the results when tabulated
at working temperatures made the Brinkmann look
as if it failed; yet, when tabulations were
corrected for temperature differences from the
reference of 20°C, the Brinkmann proved
to work with guaranteed precision.
Pervasive
Crustal Melting on a Regional Scale: Sr-Nd Isotopic
Evidence from Eocene Intrusions in NE Washington
Matthew Loewen, University of Puget Sound Geology
Department, Tacoma, WA
During the Eocene the Pacific Northwest was
the site of a short-lived but voluminous and
geochemically diverse magmatic episode, commonly
termed the Challis event. To investigate the
origins of this event we have measured whole
rock Sr and Nd isotopic compositions of 12 plutonic
and hypabyssal samples, ranging from basalt
to two-mica granite, collected along a 250 km
transect across NE Washington. This transect
crosses the 0.706 line (Armstrong 1977), the
boundary between dominantly Mesozoic crust to
the west and older crust to the east. The results
reveal a wide spread in isotopic compositions
(87Sr/86Srm = 0.7041 - 0.7262; ?Ndm = +3.8 to
-18.5) with no systematic relationship between
isotopic composition and bulk composition (e.g.,
MgO). This decoupling of isotopic composition
and bulk chemistry suggests mixing between mantle
and crustal melts was of minimal importance,
and that these rocks are dominantly of crustal
origin. The range in ?Ndm also indicates melting
of crustal sources that varied considerably
in age. Samples with ?Ndm > +2 range from
basalt (13 wt. % MgO) to two-mica granite (0.3
wt.% MgO). Such juvenile ?Ndm in a two-mica
granite precludes significant involvement of
ancient metasedimentary material and implies
rapid intracrustal differentiation of a mantle-derived
source, which may have been deep arc crust of
Mesozoic age. At the other end of the spectrum,
samples with ?Ndm < -15 come from Springdale
(87Sr/86Srm = 0.7071; ?Ndm = -18.5) and Medical
Lake (87Sr/86Srm = 0.7143; ?Ndm = -15.2) at
the eastern side of the study area. Data from
these sites, both east of the 0.706 line, are
similar to values reported for the nearby Silver
Point Quartz Monzonite and attributed to melting
of late Archean to Early Proterozoic crust (Whitehouse
et al. 1992). Other samples analyzed in this
study are broadly similar in isotopic composition
?Ndm = +1 to -8; 87Sr/86Srm = 0.706-0.709) to
rocks of the Colville Igneous Province and probably
formed by melting of Proterozoic arc crust (Morris
2000). Geographic variability in Sr-Nd data
indicates that isotopically distinct crustal
domains are juxtaposed laterally and/or vertically,
in some cases on a small scale. The sample with
the highest 87Sr/86Srm (0.7262; ?Ndm = -13.3)
is a dacite porphyry well west of the 0.706
line, while at Porcupine Bay adjacent plutons
differ by almost 10 ?Nd units (-7.4 and 2.2).
Ongoing work is designed to further characterize
the crustal sources and better understand the
nature of the thermotectonic event that drove
such widespread crustal melting.
Background
Challenges During LC/MS Ion Trap Analysis of
Marine Toxins
Heidi Marks, Applied Technology Center,
Pacific Regional Laboratory Northwest, Food
and Drug Administration, Bothell, WA
A new Thermo LTQ-XL ion trap MS coupled with
an Agilent 1200 HPLC was used to determine low
ppm levels of the common American coastal marine
toxins, domoic acid and brevetoxin-3. However,
along with the analytes were found a number
of extraneous peaks and ions to challenge the
chromatography and mass spectral interpretation.
A brief picture is presented here to stimulate
discussion among new mass and liquid chromatographers.
Attention to background ions can reveal: Less
than ideal mass resolution of ion trap can lead
to confusion with closely eluting peaks of similar
mass, or when elucidating unknown ion origin
or fragmentation; that adduct ions are common
in ion trap – one should be mindful of
unexpected combinations or clusters; and that
sample preparation materials can contribute
greatly to background, notably during residue
analysis.
Influence
of Female-Specific Ornament on Male Response
in Striped Plateau Lizards, (Sceloporus virgatus)
Brianna J. Bean, biology undergraduate, University
of Puget Sound, Tacoma, WA 98465
Male ornamentation has been extensively
researched, but few studies have focused on
female-specific ornaments. There are essentially
two hypotheses for the existence of female-specific
ornaments. The first suggests that these ornaments
are genetic correlations to male ornaments,
while the second proposes direct sexually selection.
Striped plateau lizards (Sceloporus virgatus)
exhibit a female-specific orange throat ornament,
most evident during reproductive receptivity.
Previous research has found that this ornament
indicates phenotypic quality of the female,
and males choose mates based on its color intensity.
However, the size of the ornament may better
indicate quality and more significantly impact
male choice of females. This study aimed to
manipulate the ornament size using a paint treatment
on S. virgatus in Arizona. In the laboratory,
we assessed male behavioral response to different
ornament treatments of female lizard, including
small, large, asymmetric, and no orange patches.
It was found that the size of the throat patch
did not influence male courtship behavior, although
there was a strong negative trend between male
courtship and asymmetric color patches. In addition
to the paint manipulation, we examined male-male
aggression behavior to determine if a correlation
existed between male courtship and male aggression.
None was determined, although again trends for
a correlation were seen, which suggested that
additional trials might aid in determining if
any do exist.
Preliminary
characterization of Multiple Cya-like Genes
of the Predatory Bacterium Bdellovibrio bacteriovorus
Jillian Waters, UPS Graduate, Coeur d’Alene,
ID 83815
Inspection of the published genome of the predatory
Gram-negative ?-proteobacter Bdellovibrio bacteriovorus
reveals five cya-like genes. These genes appear
related to adenylate cyclase (AC), which synthesizes
cAMP. cAMP is a global secondary messenger involved
in gene regulation for a number of organisms.
Currently, there is no known obvious role for
cAMP in Bdellovibrio and genome annotation has
not revealed any cAMP receptor protein-like
gene, making the cAMP-CRP paradigm of many Gram-negative
bacteria problematic. The object of this study
was to better characterize the five cya-like
genes of Bdellovibrio and determine if they
encode functional ACs. Additionally, we are
interested in determining if any of the putative
ACs are differentially expressed during the
biphasic life-cycle of Bdellovibrio. Bioinformatic
analysis shows significant differences in sequence
and domain structure among the five cya-like
genes. Thus far, four of the five cya-like genes
have been successfully amplified using PCR with
Bdellovibrio specific primers. For each of the
cya genes the amplicon was cloned and transformed
into E. coli strain PD200 (?cya, crp+) (Dunlap,
1989). Differential plating on MacConkey-maltose
medium has demonstrated that two of the four
genes, cyaA and cyaK, produce cAMP in E. coli.
RT-PCR analysis indicates one of these genes,
cyaA, is upregulated during the intraperiplasmic
growth phase rather than while the bacterium
is seeking new prey cells. Conversely, cyaK
appears to be inversely differentially regulated.
CyaK is shown to be upregulated during attack
phase rather than within the periplasm of the
host cell. Thus, we hope to begin to understand
the role of cAMP within Bdellovibrio and any
possible relationship to the lifecycle of the
organism. As both cyaA and cyaK are active in
Bdellovibrio (determined functionally and via
RT-PCR), the differential gene expression uncovered
may shed light on regulatory networks in this
predatory bacterium.
Cyanotoxin
ELISA Testing in Delaware: Process Development
Edythe M. Humphries, State Harmful Algal Bloom
Program Coordinator; Katherine Painter; and
Ben Pressly. State of Delaware, DNREC, Environmental
Laboratory, Dover, DE 19901
Development of the ELISA test process, using
commercial ELISA test kits, included establishing
(1) protocols for sample collection, transport,
and storage; (2) protocols for sample preparation
including lysing cells, (3) quality control
acceptance criteria for Laboratory Blanks, standard
curve goodness-of-fit, and control sample accuracy/precision;
(4) criteria for evaluating sample result precision
using duplicate absorbance measurements; (5)
acceptance criteria for the value of sample
B/Bo% ratio relative to the range of this ratio
in the calibration standards; (6) criteria for
evaluating temporal stability of manufacturer-supplied
calibration standards and controls; (7) a detailed
laboratory standard operating procedure including
preparation of environmental sample dilutions
and spiking solutions, and operation of a Bio-Tek
FL600 Fluorescence/Absorbance Plate Reader in
absorbance mode; (8) a minimum quantitative
reporting level for environmental samples; and
(9) data management protocols.
Determination of Hydrastine and Berberine
in Goldenseal Raw Materials, Extracts and Dietary
Supplements by HPLC-UV: Collaborative Study
Paula N. Brown1, Lori A. Paley1, and Mark C.
Roman2. 1NHP Research Group, Technology Centre
& School of Health Sciences, BC Institute
of Technology, Burnaby, BC. 2 Tampa Bay Analytical
Research, Inc., Largo, FL 33777
A multi-laboratory collaborative study was conducted
on a High Performance Liquid Chromatography
(HPLC) method utilizing Ultraviolet (UV) detection,
previously validated using AOAC Single Lab Validation
guidelines for the determination of hydrastine
and berberine in Goldenseal (Hydrastis canadensis
L.) raw materials, extracts, and dietary supplements
at levels ranging from 0.4% - 6% w/w. Nine collaborating
laboratories determined the hydrastine and berberine
content in eight blinded samples. Sample materials
included powdered botanical raw materials, whole
root material, and four finished product dietary
supplements containing either goldenseal powdered
root material or extract. Overall laboratory
reproducibility was evaluated through the calculation
of reproducibility standard deviations, reproducibility
relative standard deviations and HorRat values
as per AOAC guidelines inter-collaborative validation
studies. Results from the laboratories were
acceptable and the method of analysis was recommended
for Official First Action for determination
of hydrastine and berberine in goldenseal raw
materials and dietary supplement finished products
containing powdered goldenseal and goldenseal
extract.
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